eggshell.plot.plt_utils

Module Contents

eggshell.plot.plt_utils.LOGGER

eggshell.plot.plt_utils.fig2plot(fig, file_extension='png', dir_output='.', bbox_inches='tight', dpi=300, facecolor='w', edgecolor='k', figsize=(20, 10))

saving a matplotlib figure to a graphic

Parameters:

• fig – matplotlib figure object
• dir_output – directory of output plot
• file_extension – file file_extension (default=’png’)

Return str:

path to graphic

class eggshell.plot.plt_utils.MidpointNormalize(vmin=None, vmax=None, midpoint=None, clip=False)

Bases:matplotlib.colors.Normalize

__call__(self, value, clip=None)

eggshell.plot.plt_utils.concat_images(images, orientation='v', dir_output='.')

concatenation of images.

Parameters:

• images – list of images
• orientation – vertical (‘v’ default) or horizontal (‘h’) concatenation
• dir_output – output directory

Return string:

path to image

eggshell.plot.plt_utils.pdfmerge(pdfs, dir_output='.')

merge a list of pdfs

Parameters:pdfs – list of pdf files Parm dir_output:  output directory Retun str:merged pdf